FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | lane3_Index7_2.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 21921007 |
| Filtered Sequences | 0 |
| Sequence length | 90 |
| %GC | 49 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
![[WARN]](Icons/warning.png)
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCAGG | 4613680 | 2.588783 | 5.5804935 | 1 |
| GAAGA | 4644300 | 2.5853167 | 5.1064606 | 2 |
| CCTGG | 4591070 | 2.5566514 | 6.268724 | 1 |
| CTTCT | 4873850 | 2.5381637 | 6.1476994 | 1 |
| AAGAA | 4674505 | 2.5355058 | 5.030546 | 2 |
| CTGGA | 4432605 | 2.4586084 | 9.662326 | 1 |
| TCCAG | 4369280 | 2.3708441 | 6.007192 | 2 |
| CTGCT | 4352380 | 2.3438478 | 5.51474 | 1 |
| CTCCT | 4364935 | 2.2995512 | 8.356548 | 1 |
| CTGGG | 4010975 | 2.2832048 | 9.180672 | 1 |
| CAGGA | 4020900 | 2.2472122 | 5.7393646 | 1 |
| CTTCA | 4229355 | 2.2192802 | 6.2766156 | 1 |
| CTCCA | 4119410 | 2.1867085 | 8.854171 | 1 |
| CCCAG | 3951815 | 2.1692398 | 7.761901 | 1 |
| CAGAA | 3882825 | 2.1144826 | 5.243854 | 1 |
| CTCTG | 3771470 | 2.0310152 | 6.938421 | 1 |
| CTGCA | 3675550 | 1.9944146 | 5.2684264 | 1 |
| CTTCC | 3722315 | 1.9610039 | 5.1064773 | 1 |
| CTGGC | 3380050 | 1.882265 | 5.908937 | 1 |
| TGGAA | 3396375 | 1.8763704 | 5.3628416 | 2 |
| CTGAA | 3444230 | 1.8614779 | 6.1232615 | 1 |
| CTTTT | 3534985 | 1.8197727 | 5.221451 | 1 |
| CTCAG | 3213070 | 1.7434653 | 6.695934 | 1 |
| CTGAG | 3141785 | 1.7426364 | 5.344126 | 1 |
| CTTTG | 3203645 | 1.7054111 | 5.4802403 | 1 |
| CTGGT | 3027420 | 1.6665274 | 5.4484653 | 1 |
| CTTGG | 2990270 | 1.6460772 | 5.801751 | 1 |
| CTCCC | 2886915 | 1.5385698 | 5.6481533 | 1 |